• Phylum: Angiospermae
  • Class Name: Magnoliopsida
  • Order: Cucurbitales
  • Family: Cucurbitaceae
  • GC percent(%): 37.67%
  • NCBI Taxonomy:
  • Genome size: 804.11Mb
  • Gene number: 23924
  • Chr-num: 2n=20
  • Species link(%):
  • References:
  • Database:

4831 Phytohormones, 125 Flowering genes, 19 Anthocyanin genes and Resistence genes.

1428 Transcription factors in 57 familys. 19 m6A genes, 10 5mC genes, 75 H3 genes;

File Name File Size Date
Type
Total
More
CDS
Pro
Flowering genes
125
Anthocyanin genes
19
Resistence genes
Auxin (Phytohormones)
508
Abscisic Acid (Phytohormones)
1021
Brassinosteroid (Phytohormones)
937
Cytokinin (Phytohormones)
550
Ethylene (Phytohormones)
520
Ethylene (Phytohormones)
416
Jasmonate (Phytohormones)
362
Melatonin (Phytohormones)
14
Salicylic Acid (Phytohormones)
288
Strigolactone (Phytohormones)
288
Polypeptide (Phytohormones)
40
Total
More
All Families
Download
1428
Type
Total
More
CDS
Pro
MT-A70 (m6A genes Wirters)
3
Wtap (m6A genes Wirters)
1
VIRILIZER (m6A genes Wirters)
0
HAKAI (m6A genes Wirters)
1
AlkB (m6A genes Erasers)
10
YTH (m6A genes Readers)
4
DNA_methylase (5mC genes)
5
DNMT1-RFD (5mC genes)
2
TP_methylase (5mC genes)
3
PHD (H3 genes)
41
SET (H3 genes)
34
Species
Core
Soft-core
Dispensable
Specific
Herpetospermum_pedunculosum
Expanded fams
Genes gained
genes/expansion
Contracted fams
Genes lost
genes/contraction
No change
Avg. Expansion
2864
2.43
5409
1.07
26678
-0.0773298