CuIR
Cucurbitaceae Information Resource
Search
Browse
Genome synteny
>
Dotplot
Blocks
Expansion/Contraction
Functional genes
>
Phytohormones
>
Abscisic Acid
Auxin
Brassinosteroid
Cytokinin
Ethylene
Gibberellin
Jasmonate
Melatonin
Polypeptide
Salicylic Acid
Strigolactone
Flowering genes
Resistence genes
Anthocyanin genes
Transcription factors
Methylation
>
N6-methyladenosine(m6A)
>
Wirters
>
MTA70
WTAP
Virilizer
HAKAI
Erasers
>
AlkB
Readers
>
YTH family
5-methyladenosine
>
DNA_methylase
DNMT1-RFD
TP_methylase
Histone H3
>
PHD
SET
Cucurbitacin
>
Cucurbitacin synthesis genes
Heterologous biosynthesis of Cucurbitadiend
>
strains
primers
plasmids
About
Pan-genome
Genome data
Gene cluster
>
Melon
Watermelon
Cucumber
Synteny and rearrangements
>
Melon
Watermelon
Cucumber
Structural variation
>
Melon
Watermelon
Cucumber
About
Search
Annotations
CRISPR
Duplication type
Homologs
Synteny
RNA-seq
About
Charts
Functional genes & m6A
Transcription factors
Annotations
Ks curve
Karyotype evolution
Resources
Species
Databases
Download
Tools
Blast
Synteny
Primer design
JBrowse
Hmmsearch
Sequence alignment
Help
Contact
Phylum:
Angiospermae
Class Name:
Eudicots
Order:
Vitales
Family:
Vitaceae
GC percent(%):
34.40%
NCBI Taxonomy:
Genome size:
494.87Mb
Gene number:
41160
Chr-num:
2n=38
Species link(%):
References
:
Database:
Expand all
Collapse all
Downlod selected
Download Sequence
File Name
File Size
Date
Functional genes
Genome synteny
Transcription factors
Methyladenosine
Expansion/Contraction
Type
Total
More
CDS
Pro
Checkbox
Close checkbox
save Svg
save Png
Refresh
Total
More
All Families
Download
Type
Total
More
CDS
Pro
Species
Core
Soft-core
Dispensable
Specific
Vitis_vinifera
Expanded fams
Genes gained
genes/expansion
Contracted fams
Genes lost
genes/contraction
No change
Avg. Expansion
4342 (4)
9665
2.23
18147 (0)
18677
1.03
10422
-0.273829